PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G067100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 293aa    MW: 31332.2 Da    PI: 5.2404
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G067100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.52.6e-19131395128
                 NAM   5 frFhPtdeelvveyLkkkvegkk..leleevikevdiykv.ePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatg 87 
                         +rF+Pt  e v +yL + ++g    + +e+ i+++d+y   eP dL +    + kae++ + +fF+  ++++ +  r+ ra+ +g+W ++ 
  Brast05G067100.1.p  13 CRFNPTPLEAVAFYLPRLISGGGtlHGAERLIHRADVYGDrEPGDLAAafapAPKAEQRgDRFFFTLCKRQKGSRARSARAAGAGTWTSQQ 103
                         79*****************999875555667******9755*****8546663333444477*************************9875 PP

                 NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          + +v ++ g +vg  k L f k    + ++t Wvm+eyr 
  Brast05G067100.1.p 104 -TSDVEDAAGVKVGEVKNLSFKK----HKKSTGWVMEEYRC 139
                         .5899999*************83....334799******95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.8399159IPR003441NAC domain
PfamPF023651.6E-1313138IPR003441NAC domain
SuperFamilySSF1019411.03E-1914158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MEGPLDEELF QLCRFNPTPL EAVAFYLPRL ISGGGTLHGA ERLIHRADVY GDREPGDLAA  60
AFAPAPKAEQ RGDRFFFTLC KRQKGSRARS ARAAGAGTWT SQQTSDVEDA AGVKVGEVKN  120
LSFKKHKKST GWVMEEYRCL LQGAAVDGGE MVLCRIHLSP NACAQAREES AAYLRIQPGR  180
AADQDQTPMP VGKRPADQDQ NPPCPKRARV ALAPMLMTTA AAAGLGDGDA FASSWVEGML  240
AGVGGQDEVV THHAAVVESG DANTGSFNSS LDELLRLATE EEEAEQRQQV LP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239526.12e-87PREDICTED: uncharacterized protein LOC104585198
TrEMBLI1IUI42e-87I1IUI4_BRADI; Uncharacterized protein
STRINGBRADI4G43010.16e-87(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799